Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
GDF1P27539 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
GDF1P27539 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
GDF1P27539 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
GDF1P27539 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.21■□□□□ 0.18
GDF1P27539 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
GDF1P27539 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.2■□□□□ 0.18
GDF1P27539 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.2■□□□□ 0.18
GDF1P27539 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
GDF1P27539 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.2■□□□□ 0.18
GDF1P27539 SAPCD2P3-201ENST00000455031 850 ntBASIC16.2■□□□□ 0.18
GDF1P27539 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.2■□□□□ 0.18
GDF1P27539 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.2■□□□□ 0.18
GDF1P27539 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.2■□□□□ 0.18
GDF1P27539 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.2■□□□□ 0.18
GDF1P27539 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.2■□□□□ 0.18
GDF1P27539 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.2■□□□□ 0.18
GDF1P27539 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GDF1P27539 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.2■□□□□ 0.18
GDF1P27539 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GDF1P27539 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.2■□□□□ 0.18
GDF1P27539 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
GDF1P27539 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GDF1P27539 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDF1P27539 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.19■□□□□ 0.18
GDF1P27539 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GDF1P27539 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.19■□□□□ 0.18
GDF1P27539 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.19■□□□□ 0.18
GDF1P27539 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.19■□□□□ 0.18
GDF1P27539 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GDF1P27539 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 AC009113.1-201ENST00000570267 2443 ntBASIC16.19■□□□□ 0.18
GDF1P27539 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.19■□□□□ 0.18
GDF1P27539 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
GDF1P27539 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
GDF1P27539 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.19■□□□□ 0.18
GDF1P27539 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.19■□□□□ 0.18
GDF1P27539 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
GDF1P27539 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.19■□□□□ 0.18
GDF1P27539 REXO1L6P-202ENST00000619970 1078 ntBASIC16.19■□□□□ 0.18
GDF1P27539 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.19■□□□□ 0.18
GDF1P27539 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
GDF1P27539 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GDF1P27539 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.19■□□□□ 0.18
GDF1P27539 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GDF1P27539 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.19■□□□□ 0.18
GDF1P27539 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDF1P27539 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.19■□□□□ 0.18
GDF1P27539 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.18■□□□□ 0.18
GDF1P27539 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
GDF1P27539 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.18■□□□□ 0.18
GDF1P27539 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GDF1P27539 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GDF1P27539 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.18■□□□□ 0.18
GDF1P27539 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.18■□□□□ 0.18
GDF1P27539 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms