Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN3P26045 AL031133.1-201ENST00000406807 723 ntBASIC18.24■□□□□ 0.51
PTPN3P26045 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN3P26045 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN3P26045 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN3P26045 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN3P26045 AL049597.2-201ENST00000565575 961 ntBASIC18.24■□□□□ 0.51
PTPN3P26045 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN3P26045 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.24■□□□□ 0.51
PTPN3P26045 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.24■□□□□ 0.51
PTPN3P26045 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
PTPN3P26045 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN3P26045 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN3P26045 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN3P26045 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN3P26045 AC090340.1-201ENST00000620778 4980 ntBASIC18.24■□□□□ 0.51
PTPN3P26045 AL355312.1-201ENST00000407115 2176 ntBASIC18.24■□□□□ 0.51
PTPN3P26045 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN3P26045 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN3P26045 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PTPN3P26045 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PTPN3P26045 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN3P26045 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN3P26045 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTPN3P26045 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN3P26045 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN3P26045 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 MTCL1P1-201ENST00000446207 792 ntBASIC18.23■□□□□ 0.51
PTPN3P26045 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN3P26045 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN3P26045 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PTPN3P26045 AL136038.3-201ENST00000561909 1096 ntBASIC18.23■□□□□ 0.51
PTPN3P26045 AC116407.2-201ENST00000613639 860 ntBASIC18.23■□□□□ 0.51
PTPN3P26045 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN3P26045 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN3P26045 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN3P26045 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PTPN3P26045 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN3P26045 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PTPN3P26045 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PTPN3P26045 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPN3P26045 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN3P26045 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
PTPN3P26045 NTF6B-201ENST00000591913 560 ntBASIC18.22■□□□□ 0.51
PTPN3P26045 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPN3P26045 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.22■□□□□ 0.51
PTPN3P26045 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN3P26045 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN3P26045 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PTPN3P26045 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PTPN3P26045 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN3P26045 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPN3P26045 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTPN3P26045 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTPN3P26045 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN3P26045 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
PTPN3P26045 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN3P26045 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PTPN3P26045 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN3P26045 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms