Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
MSR1P21757 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
MSR1P21757 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MSR1P21757 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MSR1P21757 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MSR1P21757 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.84■□□□□ 0.13
MSR1P21757 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.84■□□□□ 0.13
MSR1P21757 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
MSR1P21757 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.84■□□□□ 0.13
MSR1P21757 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
MSR1P21757 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.84■□□□□ 0.13
MSR1P21757 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
MSR1P21757 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MSR1P21757 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MSR1P21757 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
MSR1P21757 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MSR1P21757 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MSR1P21757 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.83■□□□□ 0.13
MSR1P21757 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MSR1P21757 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
MSR1P21757 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.83■□□□□ 0.12
MSR1P21757 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
MSR1P21757 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 MIR662-201ENST00000384847 95 ntBASIC15.83■□□□□ 0.12
MSR1P21757 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.83■□□□□ 0.12
MSR1P21757 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 TMPOP1-202ENST00000424642 1267 ntBASIC15.83■□□□□ 0.12
MSR1P21757 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.83■□□□□ 0.12
MSR1P21757 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.83■□□□□ 0.12
MSR1P21757 AC022616.7-201ENST00000525383 220 ntBASIC15.83■□□□□ 0.12
MSR1P21757 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.83■□□□□ 0.12
MSR1P21757 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.83■□□□□ 0.12
MSR1P21757 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.83■□□□□ 0.12
MSR1P21757 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.83■□□□□ 0.12
MSR1P21757 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.83■□□□□ 0.12
MSR1P21757 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.83■□□□□ 0.12
MSR1P21757 AC004263.2-201ENST00000617183 678 ntBASIC15.83■□□□□ 0.12
MSR1P21757 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.83■□□□□ 0.12
MSR1P21757 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.83■□□□□ 0.12
MSR1P21757 AC005332.8-201ENST00000622750 2735 ntBASIC15.83■□□□□ 0.12
MSR1P21757 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
MSR1P21757 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 LINC01311-201ENST00000565162 1445 ntBASIC15.83■□□□□ 0.12
MSR1P21757 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
MSR1P21757 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.83■□□□□ 0.12
MSR1P21757 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MSR1P21757 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.82■□□□□ 0.12
MSR1P21757 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MSR1P21757 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MSR1P21757 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MSR1P21757 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
MSR1P21757 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.82■□□□□ 0.12
MSR1P21757 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.82■□□□□ 0.12
MSR1P21757 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 IGHGP-201ENST00000390555 1178 ntBASIC15.82■□□□□ 0.12
MSR1P21757 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 TSPY12P-201ENST00000421279 868 ntBASIC15.82■□□□□ 0.12
MSR1P21757 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.82■□□□□ 0.12
MSR1P21757 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.82■□□□□ 0.12
MSR1P21757 DUX4L26-201ENST00000489078 1255 ntBASIC15.82■□□□□ 0.12
MSR1P21757 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.82■□□□□ 0.12
MSR1P21757 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.82■□□□□ 0.12
MSR1P21757 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.82■□□□□ 0.12
MSR1P21757 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MSR1P21757 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.82■□□□□ 0.12
MSR1P21757 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.82■□□□□ 0.12
MSR1P21757 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.82■□□□□ 0.12
MSR1P21757 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MSR1P21757 AC012317.2-201ENST00000623305 2251 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms