Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP2B1P20020 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP2B1P20020 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP2B1P20020 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP2B1P20020 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP2B1P20020 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2B1P20020 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP2B1P20020 AL590326.2-201ENST00000625139 305 ntBASIC20.63■□□□□ 0.89
ATP2B1P20020 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATP2B1P20020 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
ATP2B1P20020 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B1P20020 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP2B1P20020 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATP2B1P20020 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2B1P20020 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2B1P20020 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ATP2B1P20020 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP2B1P20020 AL671277.2-201ENST00000458060 996 ntBASIC20.62■□□□□ 0.89
ATP2B1P20020 AP003733.1-201ENST00000491725 852 ntBASIC20.62■□□□□ 0.89
ATP2B1P20020 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP2B1P20020 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ATP2B1P20020 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
ATP2B1P20020 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP2B1P20020 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2B1P20020 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2B1P20020 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
ATP2B1P20020 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
ATP2B1P20020 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
ATP2B1P20020 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2B1P20020 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2B1P20020 LINC01238-205ENST00000567549 1107 ntBASIC20.61■□□□□ 0.89
ATP2B1P20020 NTF6B-201ENST00000591913 560 ntBASIC20.61■□□□□ 0.89
ATP2B1P20020 AC008687.5-201ENST00000593746 558 ntBASIC20.61■□□□□ 0.89
ATP2B1P20020 AC083849.1-201ENST00000615227 514 ntBASIC20.61■□□□□ 0.89
ATP2B1P20020 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2B1P20020 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2B1P20020 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2B1P20020 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP2B1P20020 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ATP2B1P20020 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP2B1P20020 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP2B1P20020 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 SPDYE13P-201ENST00000445314 798 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms