Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA4P12838 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
DEFA4P12838 AL390955.1-201ENST00000428694 934 ntBASIC14.58□□□□□ -0.08
DEFA4P12838 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.58□□□□□ -0.08
DEFA4P12838 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.58□□□□□ -0.08
DEFA4P12838 AC128688.1-201ENST00000487626 519 ntBASIC14.58□□□□□ -0.08
DEFA4P12838 KRT18P41-201ENST00000518924 1277 ntBASIC14.58□□□□□ -0.08
DEFA4P12838 AP003041.3-201ENST00000527151 707 ntBASIC14.58□□□□□ -0.08
DEFA4P12838 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.58□□□□□ -0.08
DEFA4P12838 FITM1-202ENST00000559294 800 ntBASIC14.58□□□□□ -0.08
DEFA4P12838 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA4P12838 AL353719.1-201ENST00000566847 864 ntBASIC14.58□□□□□ -0.08
DEFA4P12838 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA4P12838 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.58□□□□□ -0.08
DEFA4P12838 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA4P12838 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA4P12838 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.58□□□□□ -0.08
DEFA4P12838 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.58□□□□□ -0.08
DEFA4P12838 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA4P12838 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA4P12838 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA4P12838 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
DEFA4P12838 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA4P12838 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
DEFA4P12838 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.58□□□□□ -0.08
DEFA4P12838 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
DEFA4P12838 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
DEFA4P12838 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
DEFA4P12838 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.57□□□□□ -0.08
DEFA4P12838 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.57□□□□□ -0.08
DEFA4P12838 MIR4497-201ENST00000583208 89 ntBASIC14.57□□□□□ -0.08
DEFA4P12838 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
DEFA4P12838 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 AC099343.3-201ENST00000605834 2503 ntBASIC14.57□□□□□ -0.08
DEFA4P12838 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
DEFA4P12838 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA4P12838 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
DEFA4P12838 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.56□□□□□ -0.08
DEFA4P12838 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.56□□□□□ -0.08
DEFA4P12838 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
DEFA4P12838 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
DEFA4P12838 KRT18P23-201ENST00000435622 1283 ntBASIC14.56□□□□□ -0.08
DEFA4P12838 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.56□□□□□ -0.08
DEFA4P12838 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.56□□□□□ -0.08
DEFA4P12838 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.56□□□□□ -0.08
DEFA4P12838 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.56□□□□□ -0.08
DEFA4P12838 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
DEFA4P12838 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 AC124067.4-201ENST00000519691 2379 ntBASIC14.56□□□□□ -0.08
DEFA4P12838 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
DEFA4P12838 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.56□□□□□ -0.08
DEFA4P12838 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
DEFA4P12838 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA4P12838 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
DEFA4P12838 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
DEFA4P12838 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms