Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.78■□□□□ 0.6
RARAP10276 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.78■□□□□ 0.6
RARAP10276 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.78■□□□□ 0.6
RARAP10276 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.78■□□□□ 0.6
RARAP10276 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RARAP10276 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.78■□□□□ 0.6
RARAP10276 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RARAP10276 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.77■□□□□ 0.6
RARAP10276 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RARAP10276 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RARAP10276 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.77■□□□□ 0.6
RARAP10276 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.77■□□□□ 0.6
RARAP10276 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.77■□□□□ 0.6
RARAP10276 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RARAP10276 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RARAP10276 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.77■□□□□ 0.6
RARAP10276 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RARAP10276 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RARAP10276 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.77■□□□□ 0.59
RARAP10276 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RARAP10276 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.77■□□□□ 0.59
RARAP10276 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RARAP10276 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RARAP10276 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RARAP10276 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RARAP10276 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RARAP10276 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.76■□□□□ 0.59
RARAP10276 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RARAP10276 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.76■□□□□ 0.59
RARAP10276 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RARAP10276 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.76■□□□□ 0.59
RARAP10276 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.76■□□□□ 0.59
RARAP10276 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 RCN1P1-201ENST00000400413 996 ntBASIC18.76■□□□□ 0.59
RARAP10276 HOMER2P1-201ENST00000455653 964 ntBASIC18.76■□□□□ 0.59
RARAP10276 AL359075.1-203ENST00000462729 1002 ntBASIC18.76■□□□□ 0.59
RARAP10276 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.76■□□□□ 0.59
RARAP10276 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.76■□□□□ 0.59
RARAP10276 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.76■□□□□ 0.59
RARAP10276 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RARAP10276 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.76■□□□□ 0.59
RARAP10276 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.76■□□□□ 0.59
RARAP10276 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RARAP10276 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RARAP10276 HTR7P1-202ENST00000624664 4411 ntBASIC18.75■□□□□ 0.59
RARAP10276 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RARAP10276 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms