Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RBP1P09455 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.64■□□□□ 0.41
RBP1P09455 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RBP1P09455 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.64■□□□□ 0.41
RBP1P09455 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RBP1P09455 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.64■□□□□ 0.41
RBP1P09455 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.64■□□□□ 0.41
RBP1P09455 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RBP1P09455 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RBP1P09455 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RBP1P09455 AC034232.1-201ENST00000506026 1064 ntBASIC17.64■□□□□ 0.41
RBP1P09455 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RBP1P09455 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RBP1P09455 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RBP1P09455 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.64■□□□□ 0.41
RBP1P09455 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RBP1P09455 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
RBP1P09455 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.64■□□□□ 0.41
RBP1P09455 LINC01568-207ENST00000641790 1380 ntBASIC17.64■□□□□ 0.41
RBP1P09455 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RBP1P09455 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RBP1P09455 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.63■□□□□ 0.41
RBP1P09455 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RBP1P09455 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 KRT89P-201ENST00000620027 1478 ntBASIC17.63■□□□□ 0.41
RBP1P09455 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.63■□□□□ 0.41
RBP1P09455 HLA-J-201ENST00000462773 1622 ntBASIC17.63■□□□□ 0.41
RBP1P09455 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.63■□□□□ 0.41
RBP1P09455 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.63■□□□□ 0.41
RBP1P09455 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.63■□□□□ 0.41
RBP1P09455 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.63■□□□□ 0.41
RBP1P09455 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 KRT18P22-201ENST00000402024 1347 ntBASIC17.63■□□□□ 0.41
RBP1P09455 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RBP1P09455 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.63■□□□□ 0.41
RBP1P09455 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
RBP1P09455 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RBP1P09455 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RBP1P09455 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RBP1P09455 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.63■□□□□ 0.41
RBP1P09455 LINC00304-203ENST00000565008 1864 ntBASIC17.63■□□□□ 0.41
RBP1P09455 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
RBP1P09455 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RBP1P09455 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.62■□□□□ 0.41
RBP1P09455 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RBP1P09455 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.62■□□□□ 0.41
RBP1P09455 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.62■□□□□ 0.41
RBP1P09455 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.62■□□□□ 0.41
RBP1P09455 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
RBP1P09455 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 KRT18P65-201ENST00000439811 1286 ntBASIC17.62■□□□□ 0.41
RBP1P09455 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.62■□□□□ 0.41
RBP1P09455 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.62■□□□□ 0.41
RBP1P09455 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.62■□□□□ 0.41
RBP1P09455 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.62■□□□□ 0.41
RBP1P09455 AC024563.2-201ENST00000603282 481 ntBASIC17.62■□□□□ 0.41
RBP1P09455 LINC01451-201ENST00000623792 534 ntBASIC17.62■□□□□ 0.41
RBP1P09455 AC141257.4-201ENST00000634557 245 ntBASIC17.62■□□□□ 0.41
RBP1P09455 AC136944.6-201ENST00000634818 245 ntBASIC17.62■□□□□ 0.41
RBP1P09455 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.62■□□□□ 0.41
RBP1P09455 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RBP1P09455 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RBP1P09455 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.62■□□□□ 0.41
RBP1P09455 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.62■□□□□ 0.41
RBP1P09455 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RBP1P09455 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RBP1P09455 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RBP1P09455 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RBP1P09455 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBP1P09455 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.61■□□□□ 0.41
RBP1P09455 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.61■□□□□ 0.41
RBP1P09455 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RBP1P09455 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms