Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL354751.1-201ENST00000412768 1863 ntBASIC18.02■□□□□ 0.48
RETP07949 ABCD1P5-201ENST00000445663 754 ntBASIC18.02■□□□□ 0.48
RETP07949 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.02■□□□□ 0.48
RETP07949 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.02■□□□□ 0.48
RETP07949 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.02■□□□□ 0.48
RETP07949 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RETP07949 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
RETP07949 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RETP07949 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RETP07949 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.02■□□□□ 0.47
RETP07949 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RETP07949 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.02■□□□□ 0.47
RETP07949 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.02■□□□□ 0.47
RETP07949 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.01■□□□□ 0.47
RETP07949 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RETP07949 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.01■□□□□ 0.47
RETP07949 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RETP07949 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RETP07949 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.01■□□□□ 0.47
RETP07949 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.01■□□□□ 0.47
RETP07949 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.01■□□□□ 0.47
RETP07949 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 METTL21AP1-201ENST00000438852 635 ntBASIC18.01■□□□□ 0.47
RETP07949 CYMP-203ENST00000474680 1263 ntBASIC18.01■□□□□ 0.47
RETP07949 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.01■□□□□ 0.47
RETP07949 UNC93B6-202ENST00000528242 690 ntBASIC18.01■□□□□ 0.47
RETP07949 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.01■□□□□ 0.47
RETP07949 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 AC105339.3-201ENST00000560043 636 ntBASIC18.01■□□□□ 0.47
RETP07949 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RETP07949 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.01■□□□□ 0.47
RETP07949 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 AC008687.5-201ENST00000593746 558 ntBASIC18.01■□□□□ 0.47
RETP07949 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.01■□□□□ 0.47
RETP07949 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RETP07949 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.01■□□□□ 0.47
RETP07949 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18■□□□□ 0.47
RETP07949 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18■□□□□ 0.47
RETP07949 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18■□□□□ 0.47
RETP07949 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18■□□□□ 0.47
RETP07949 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18■□□□□ 0.47
RETP07949 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18■□□□□ 0.47
RETP07949 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18■□□□□ 0.47
RETP07949 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18■□□□□ 0.47
RETP07949 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18■□□□□ 0.47
RETP07949 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18■□□□□ 0.47
RETP07949 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 AC025062.2-201ENST00000605477 670 ntBASIC18■□□□□ 0.47
RETP07949 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RETP07949 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18■□□□□ 0.47
RETP07949 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
RETP07949 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RETP07949 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RETP07949 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.99■□□□□ 0.47
RETP07949 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.99■□□□□ 0.47
RETP07949 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.99■□□□□ 0.47
RETP07949 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.99■□□□□ 0.47
RETP07949 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.99■□□□□ 0.47
RETP07949 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.99■□□□□ 0.47
RETP07949 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.99■□□□□ 0.47
RETP07949 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.99■□□□□ 0.47
RETP07949 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.99■□□□□ 0.47
RETP07949 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.99■□□□□ 0.47
RETP07949 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.99■□□□□ 0.47
RETP07949 AC113404.2-201ENST00000507884 177 ntBASIC17.99■□□□□ 0.47
RETP07949 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.99■□□□□ 0.47
RETP07949 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms