Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC23.34■■□□□ 1.33
COL5A2P05997 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.34■■□□□ 1.33
COL5A2P05997 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.34■■□□□ 1.33
COL5A2P05997 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 CD99-202ENST00000381180 530 ntTSL 2 BASIC23.34■■□□□ 1.33
COL5A2P05997 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC23.34■■□□□ 1.33
COL5A2P05997 WBP2-203ENST00000433525 928 ntTSL 2 BASIC23.34■■□□□ 1.33
COL5A2P05997 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC23.34■■□□□ 1.33
COL5A2P05997 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC23.34■■□□□ 1.33
COL5A2P05997 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC23.34■■□□□ 1.33
COL5A2P05997 PRR29-209ENST00000582540 967 ntTSL 2 BASIC23.34■■□□□ 1.33
COL5A2P05997 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
COL5A2P05997 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL5A2P05997 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL5A2P05997 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
COL5A2P05997 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL5A2P05997 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.33■■□□□ 1.33
COL5A2P05997 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.33■■□□□ 1.33
COL5A2P05997 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
COL5A2P05997 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL5A2P05997 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC23.33■■□□□ 1.33
COL5A2P05997 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC23.33■■□□□ 1.33
COL5A2P05997 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.33■■□□□ 1.33
COL5A2P05997 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC23.33■■□□□ 1.33
COL5A2P05997 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC23.33■■□□□ 1.33
COL5A2P05997 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL5A2P05997 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL5A2P05997 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
COL5A2P05997 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.33■■□□□ 1.33
COL5A2P05997 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.33■■□□□ 1.33
COL5A2P05997 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL5A2P05997 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.33■■□□□ 1.32
COL5A2P05997 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL5A2P05997 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
COL5A2P05997 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC23.33■■□□□ 1.32
COL5A2P05997 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL5A2P05997 AC092919.2-201ENST00000623631 1645 ntBASIC23.32■■□□□ 1.32
COL5A2P05997 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
COL5A2P05997 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL5A2P05997 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.32■■□□□ 1.32
COL5A2P05997 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL5A2P05997 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
COL5A2P05997 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL5A2P05997 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL5A2P05997 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC23.32■■□□□ 1.32
COL5A2P05997 STK19B-204ENST00000512515 211 ntBASIC23.32■■□□□ 1.32
COL5A2P05997 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.32■■□□□ 1.32
COL5A2P05997 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC23.32■■□□□ 1.32
COL5A2P05997 AC007064.4-201ENST00000637740 555 ntBASIC23.32■■□□□ 1.32
COL5A2P05997 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL5A2P05997 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL5A2P05997 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL5A2P05997 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.32■■□□□ 1.32
COL5A2P05997 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.32■■□□□ 1.32
COL5A2P05997 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC23.32■■□□□ 1.32
COL5A2P05997 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
COL5A2P05997 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL5A2P05997 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL5A2P05997 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL5A2P05997 AC097637.2-201ENST00000624096 1997 ntBASIC23.31■■□□□ 1.32
COL5A2P05997 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL5A2P05997 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL5A2P05997 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC23.31■■□□□ 1.32
COL5A2P05997 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC23.31■■□□□ 1.32
COL5A2P05997 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
COL5A2P05997 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC23.31■■□□□ 1.32
COL5A2P05997 CYB561-216ENST00000582297 897 ntTSL 3 BASIC23.31■■□□□ 1.32
COL5A2P05997 AL390955.2-201ENST00000603032 514 ntBASIC23.31■■□□□ 1.32
COL5A2P05997 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC23.31■■□□□ 1.32
COL5A2P05997 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL5A2P05997 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC23.31■■□□□ 1.32
COL5A2P05997 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 LINC00982-205ENST00000420957 435 ntBASIC23.3■■□□□ 1.32
COL5A2P05997 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC23.3■■□□□ 1.32
COL5A2P05997 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.3■■□□□ 1.32
COL5A2P05997 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.3■■□□□ 1.32
COL5A2P05997 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 MED16-214ENST00000617672 554 ntTSL 5 BASIC23.3■■□□□ 1.32
COL5A2P05997 AC009093.7-201ENST00000623853 1223 ntBASIC23.3■■□□□ 1.32
COL5A2P05997 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.3■■□□□ 1.32
COL5A2P05997 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.3■■□□□ 1.32
COL5A2P05997 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC23.3■■□□□ 1.32
COL5A2P05997 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL5A2P05997 NEK7-201ENST00000367383 586 ntTSL 2 BASIC23.3■■□□□ 1.32
COL5A2P05997 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC23.3■■□□□ 1.32
COL5A2P05997 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms