Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CHGBP05060 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGBP05060 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.46■■□□□ 1.03
CHGBP05060 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGBP05060 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGBP05060 EMBP1-201ENST00000458200 901 ntBASIC21.46■■□□□ 1.03
CHGBP05060 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.46■■□□□ 1.03
CHGBP05060 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.46■■□□□ 1.03
CHGBP05060 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.46■■□□□ 1.03
CHGBP05060 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 AL691432.3-201ENST00000621860 400 ntBASIC21.46■■□□□ 1.03
CHGBP05060 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGBP05060 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGBP05060 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHGBP05060 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CHGBP05060 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CHGBP05060 AC020763.4-201ENST00000623414 4170 ntBASIC21.46■■□□□ 1.03
CHGBP05060 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CHGBP05060 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGBP05060 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.45■■□□□ 1.03
CHGBP05060 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.45■■□□□ 1.03
CHGBP05060 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CHGBP05060 INTS4P1-201ENST00000438455 1935 ntBASIC21.45■■□□□ 1.02
CHGBP05060 AC006116.8-202ENST00000587620 1550 ntBASIC21.45■■□□□ 1.02
CHGBP05060 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGBP05060 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.45■■□□□ 1.02
CHGBP05060 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CHGBP05060 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
CHGBP05060 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.45■■□□□ 1.02
CHGBP05060 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGBP05060 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.45■■□□□ 1.02
CHGBP05060 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.45■■□□□ 1.02
CHGBP05060 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.45■■□□□ 1.02
CHGBP05060 MIR5100-201ENST00000579544 119 ntBASIC21.45■■□□□ 1.02
CHGBP05060 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CHGBP05060 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGBP05060 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.45■■□□□ 1.02
CHGBP05060 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.45■■□□□ 1.02
CHGBP05060 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGBP05060 REXO1L11P-201ENST00000620964 1927 ntBASIC21.45■■□□□ 1.02
CHGBP05060 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.45■■□□□ 1.02
CHGBP05060 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHGBP05060 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CHGBP05060 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGBP05060 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CHGBP05060 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.45■■□□□ 1.02
CHGBP05060 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHGBP05060 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.44■■□□□ 1.02
CHGBP05060 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGBP05060 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGBP05060 SIRPAP1-201ENST00000448467 1770 ntBASIC21.44■■□□□ 1.02
CHGBP05060 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.44■■□□□ 1.02
CHGBP05060 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGBP05060 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGBP05060 AC096633.1-201ENST00000422446 749 ntBASIC21.44■■□□□ 1.02
CHGBP05060 VENTXP7-201ENST00000475503 772 ntBASIC21.44■■□□□ 1.02
CHGBP05060 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.44■■□□□ 1.02
CHGBP05060 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHGBP05060 AC114341.1-201ENST00000618070 349 ntBASIC21.44■■□□□ 1.02
CHGBP05060 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.44■■□□□ 1.02
CHGBP05060 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.44■■□□□ 1.02
CHGBP05060 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGBP05060 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.44■■□□□ 1.02
CHGBP05060 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CHGBP05060 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.44■■□□□ 1.02
CHGBP05060 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.44■■□□□ 1.02
CHGBP05060 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGBP05060 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHGBP05060 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.43■■□□□ 1.02
CHGBP05060 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHGBP05060 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.43■■□□□ 1.02
CHGBP05060 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.43■■□□□ 1.02
CHGBP05060 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.43■■□□□ 1.02
CHGBP05060 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHGBP05060 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.43■■□□□ 1.02
CHGBP05060 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.43■■□□□ 1.02
CHGBP05060 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms