Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX4O95219 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX4O95219 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SNX4O95219 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SNX4O95219 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SNX4O95219 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
SNX4O95219 HLA-F-220ENST00000434407 884 ntBASIC16.84■□□□□ 0.29
SNX4O95219 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.84■□□□□ 0.29
SNX4O95219 AC092597.1-201ENST00000487352 616 ntBASIC16.84■□□□□ 0.29
SNX4O95219 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX4O95219 AC083849.1-201ENST00000615227 514 ntBASIC16.84■□□□□ 0.29
SNX4O95219 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX4O95219 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.84■□□□□ 0.29
SNX4O95219 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SNX4O95219 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 MYLKP1-201ENST00000509077 1580 ntBASIC16.84■□□□□ 0.29
SNX4O95219 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 AL391807.1-203ENST00000604392 2365 ntBASIC16.84■□□□□ 0.29
SNX4O95219 PCDHA12-202ENST00000613593 2588 ntBASIC16.84■□□□□ 0.29
SNX4O95219 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
SNX4O95219 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.83■□□□□ 0.29
SNX4O95219 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SNX4O95219 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNX4O95219 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNX4O95219 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNX4O95219 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SNX4O95219 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNX4O95219 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX4O95219 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX4O95219 PCED1CP-201ENST00000419887 785 ntBASIC16.83■□□□□ 0.28
SNX4O95219 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SNX4O95219 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX4O95219 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SNX4O95219 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX4O95219 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX4O95219 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX4O95219 AP000550.4-202ENST00000639755 178 ntBASIC16.83■□□□□ 0.28
SNX4O95219 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SNX4O95219 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX4O95219 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SNX4O95219 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX4O95219 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNX4O95219 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX4O95219 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNX4O95219 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX4O95219 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX4O95219 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX4O95219 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.82■□□□□ 0.28
SNX4O95219 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.82■□□□□ 0.28
SNX4O95219 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX4O95219 AC079602.3-201ENST00000623931 403 ntBASIC16.82■□□□□ 0.28
SNX4O95219 AL358472.4-201ENST00000633140 710 ntBASIC16.82■□□□□ 0.28
SNX4O95219 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX4O95219 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX4O95219 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms