Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLPXO76031 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLPXO76031 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.28■□□□□ 0.2
CLPXO76031 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLPXO76031 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.28■□□□□ 0.2
CLPXO76031 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.28■□□□□ 0.2
CLPXO76031 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLPXO76031 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLPXO76031 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLPXO76031 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLPXO76031 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.27■□□□□ 0.2
CLPXO76031 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
CLPXO76031 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLPXO76031 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.27■□□□□ 0.2
CLPXO76031 HYMAI-201ENST00000635591 3347 ntBASIC16.27■□□□□ 0.2
CLPXO76031 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CLPXO76031 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 AL596275.1-201ENST00000423464 877 ntBASIC16.27■□□□□ 0.2
CLPXO76031 UBE2SP1-201ENST00000450587 669 ntBASIC16.27■□□□□ 0.2
CLPXO76031 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CLPXO76031 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.27■□□□□ 0.2
CLPXO76031 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLPXO76031 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLPXO76031 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.27■□□□□ 0.19
CLPXO76031 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.19
CLPXO76031 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.27■□□□□ 0.19
CLPXO76031 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.27■□□□□ 0.19
CLPXO76031 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLPXO76031 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLPXO76031 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.27■□□□□ 0.19
CLPXO76031 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.27■□□□□ 0.19
CLPXO76031 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.27■□□□□ 0.19
CLPXO76031 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLPXO76031 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLPXO76031 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.26■□□□□ 0.19
CLPXO76031 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
CLPXO76031 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.26■□□□□ 0.19
CLPXO76031 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.26■□□□□ 0.19
CLPXO76031 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLPXO76031 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.26■□□□□ 0.19
CLPXO76031 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.26■□□□□ 0.19
CLPXO76031 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.26■□□□□ 0.19
CLPXO76031 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.26■□□□□ 0.19
CLPXO76031 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.26■□□□□ 0.19
CLPXO76031 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.26■□□□□ 0.19
CLPXO76031 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.26■□□□□ 0.19
CLPXO76031 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.26■□□□□ 0.19
CLPXO76031 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.26■□□□□ 0.19
CLPXO76031 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.26■□□□□ 0.19
CLPXO76031 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLPXO76031 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.26■□□□□ 0.19
CLPXO76031 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLPXO76031 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.26■□□□□ 0.19
CLPXO76031 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLPXO76031 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.26■□□□□ 0.19
CLPXO76031 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLPXO76031 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLPXO76031 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLPXO76031 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms