Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PLOD3O60568 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PLOD3O60568 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PLOD3O60568 LINC01311-201ENST00000565162 1445 ntBASIC16.88■□□□□ 0.29
PLOD3O60568 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PLOD3O60568 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.88■□□□□ 0.29
PLOD3O60568 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.88■□□□□ 0.29
PLOD3O60568 FAM210CP-201ENST00000445714 574 ntBASIC16.88■□□□□ 0.29
PLOD3O60568 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.88■□□□□ 0.29
PLOD3O60568 KRT18P21-201ENST00000515767 1272 ntBASIC16.88■□□□□ 0.29
PLOD3O60568 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.88■□□□□ 0.29
PLOD3O60568 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PLOD3O60568 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 AC008764.6-201ENST00000595909 2069 ntBASIC16.88■□□□□ 0.29
PLOD3O60568 LINC00602-201ENST00000629776 2065 ntBASIC16.88■□□□□ 0.29
PLOD3O60568 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PLOD3O60568 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PLOD3O60568 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PLOD3O60568 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PLOD3O60568 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PLOD3O60568 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.88■□□□□ 0.29
PLOD3O60568 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.88■□□□□ 0.29
PLOD3O60568 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.88■□□□□ 0.29
PLOD3O60568 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.88■□□□□ 0.29
PLOD3O60568 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PLOD3O60568 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PLOD3O60568 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.88■□□□□ 0.29
PLOD3O60568 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
PLOD3O60568 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PLOD3O60568 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.87■□□□□ 0.29
PLOD3O60568 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PLOD3O60568 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PLOD3O60568 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.87■□□□□ 0.29
PLOD3O60568 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.87■□□□□ 0.29
PLOD3O60568 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.87■□□□□ 0.29
PLOD3O60568 ZNF444P1-201ENST00000559497 298 ntBASIC16.87■□□□□ 0.29
PLOD3O60568 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.87■□□□□ 0.29
PLOD3O60568 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PLOD3O60568 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.87■□□□□ 0.29
PLOD3O60568 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
PLOD3O60568 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PLOD3O60568 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PLOD3O60568 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PLOD3O60568 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PLOD3O60568 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 KRT18P55-202ENST00000578578 1546 ntBASIC16.86■□□□□ 0.29
PLOD3O60568 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.86■□□□□ 0.29
PLOD3O60568 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PLOD3O60568 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.86■□□□□ 0.29
PLOD3O60568 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.86■□□□□ 0.29
PLOD3O60568 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PLOD3O60568 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PLOD3O60568 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.86■□□□□ 0.29
PLOD3O60568 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.86■□□□□ 0.29
PLOD3O60568 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.86■□□□□ 0.29
PLOD3O60568 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms