Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SSSCA1O60232 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 KRT17P3-201ENST00000420566 1262 ntBASIC14.61□□□□□ -0.07
SSSCA1O60232 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 AP002982.1-201ENST00000492365 877 ntBASIC14.61□□□□□ -0.07
SSSCA1O60232 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.61□□□□□ -0.07
SSSCA1O60232 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.61□□□□□ -0.07
SSSCA1O60232 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.61□□□□□ -0.07
SSSCA1O60232 AC133041.1-202ENST00000642053 222 ntBASIC14.61□□□□□ -0.07
SSSCA1O60232 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.61□□□□□ -0.07
SSSCA1O60232 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.61□□□□□ -0.07
SSSCA1O60232 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 AL139384.1-201ENST00000612143 3047 ntBASIC14.6□□□□□ -0.07
SSSCA1O60232 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SSSCA1O60232 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SSSCA1O60232 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
SSSCA1O60232 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SSSCA1O60232 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.6□□□□□ -0.07
SSSCA1O60232 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SSSCA1O60232 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SSSCA1O60232 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SSSCA1O60232 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.6□□□□□ -0.07
SSSCA1O60232 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.6□□□□□ -0.07
SSSCA1O60232 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SSSCA1O60232 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SSSCA1O60232 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.6□□□□□ -0.07
SSSCA1O60232 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.6□□□□□ -0.07
SSSCA1O60232 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.6□□□□□ -0.07
SSSCA1O60232 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SSSCA1O60232 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSSCA1O60232 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.59□□□□□ -0.07
SSSCA1O60232 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.59□□□□□ -0.07
SSSCA1O60232 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSSCA1O60232 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SSSCA1O60232 AC069152.1-201ENST00000438030 544 ntBASIC14.59□□□□□ -0.07
SSSCA1O60232 RPS2P4-201ENST00000476944 856 ntBASIC14.59□□□□□ -0.07
SSSCA1O60232 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.59□□□□□ -0.07
SSSCA1O60232 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.59□□□□□ -0.07
SSSCA1O60232 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.59□□□□□ -0.07
SSSCA1O60232 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.59□□□□□ -0.07
SSSCA1O60232 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms