Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3O43889 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3O43889 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CREB3O43889 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.68■□□□□ 0.58
CREB3O43889 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3O43889 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CREB3O43889 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CREB3O43889 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.67■□□□□ 0.58
CREB3O43889 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3O43889 KRT18P35-201ENST00000510488 1269 ntBASIC18.67■□□□□ 0.58
CREB3O43889 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3O43889 AL136038.3-201ENST00000561909 1096 ntBASIC18.67■□□□□ 0.58
CREB3O43889 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3O43889 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.67■□□□□ 0.58
CREB3O43889 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.67■□□□□ 0.58
CREB3O43889 AL121956.5-201ENST00000625261 221 ntBASIC18.67■□□□□ 0.58
CREB3O43889 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.67■□□□□ 0.58
CREB3O43889 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CREB3O43889 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.67■□□□□ 0.58
CREB3O43889 AL353692.3-201ENST00000407031 1396 ntBASIC18.67■□□□□ 0.58
CREB3O43889 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CREB3O43889 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CREB3O43889 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.66■□□□□ 0.58
CREB3O43889 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CREB3O43889 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CREB3O43889 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CREB3O43889 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CREB3O43889 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CREB3O43889 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CREB3O43889 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CREB3O43889 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CREB3O43889 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CREB3O43889 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CREB3O43889 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.66■□□□□ 0.58
CREB3O43889 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.66■□□□□ 0.58
CREB3O43889 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.66■□□□□ 0.58
CREB3O43889 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.66■□□□□ 0.58
CREB3O43889 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 AC012313.1-201ENST00000593393 3059 ntBASIC18.66■□□□□ 0.58
CREB3O43889 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.66■□□□□ 0.58
CREB3O43889 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CREB3O43889 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CREB3O43889 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.66■□□□□ 0.58
CREB3O43889 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.66■□□□□ 0.58
CREB3O43889 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CREB3O43889 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.65■□□□□ 0.58
CREB3O43889 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.65■□□□□ 0.58
CREB3O43889 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.65■□□□□ 0.58
CREB3O43889 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CREB3O43889 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 TSPY12P-201ENST00000421279 868 ntBASIC18.65■□□□□ 0.58
CREB3O43889 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.65■□□□□ 0.58
CREB3O43889 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.65■□□□□ 0.58
CREB3O43889 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.65■□□□□ 0.58
CREB3O43889 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.65■□□□□ 0.58
CREB3O43889 AL445228.2-201ENST00000605589 952 ntBASIC18.65■□□□□ 0.58
CREB3O43889 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CREB3O43889 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CREB3O43889 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CREB3O43889 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms