Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 RNF152P1-201ENST00000397754 604 ntBASIC16.62■□□□□ 0.25
ARHGEF9O43307 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 AC116562.4-202ENST00000641738 218 ntBASIC16.62■□□□□ 0.25
ARHGEF9O43307 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 ABALON-201ENST00000629058 1903 ntBASIC16.62■□□□□ 0.25
ARHGEF9O43307 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 AL023284.2-201ENST00000405850 579 ntBASIC16.61■□□□□ 0.25
ARHGEF9O43307 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 MCCD1P1-208ENST00000445732 328 ntBASIC16.61■□□□□ 0.25
ARHGEF9O43307 CCR12P-201ENST00000446203 998 ntBASIC16.61■□□□□ 0.25
ARHGEF9O43307 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 KRT18P56-201ENST00000507275 550 ntBASIC16.61■□□□□ 0.25
ARHGEF9O43307 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 GPAT2P1-201ENST00000444924 1672 ntBASIC16.61■□□□□ 0.25
ARHGEF9O43307 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ARHGEF9O43307 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF9O43307 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 MYLKP1-201ENST00000509077 1580 ntBASIC16.6■□□□□ 0.25
ARHGEF9O43307 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 AC084018.2-201ENST00000613093 2607 ntBASIC16.6■□□□□ 0.25
ARHGEF9O43307 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.6■□□□□ 0.25
ARHGEF9O43307 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ARHGEF9O43307 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF9O43307 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms