Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFA4O00483 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFA4O00483 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NDUFA4O00483 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NDUFA4O00483 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFA4O00483 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
NDUFA4O00483 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFA4O00483 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.75□□□□□ -0.21
NDUFA4O00483 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFA4O00483 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFA4O00483 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFA4O00483 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NDUFA4O00483 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFA4O00483 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.75□□□□□ -0.21
NDUFA4O00483 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFA4O00483 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NDUFA4O00483 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFA4O00483 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NDUFA4O00483 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.74□□□□□ -0.21
NDUFA4O00483 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.74□□□□□ -0.21
NDUFA4O00483 AL031133.1-201ENST00000406807 723 ntBASIC13.74□□□□□ -0.21
NDUFA4O00483 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NDUFA4O00483 DDX43P3-201ENST00000441064 443 ntBASIC13.74□□□□□ -0.21
NDUFA4O00483 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.74□□□□□ -0.21
NDUFA4O00483 RNF126P1-202ENST00000569893 925 ntBASIC13.74□□□□□ -0.21
NDUFA4O00483 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFA4O00483 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 AC100803.2-201ENST00000562459 1963 ntBASIC13.74□□□□□ -0.21
NDUFA4O00483 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
NDUFA4O00483 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFA4O00483 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
NDUFA4O00483 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFA4O00483 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
NDUFA4O00483 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
NDUFA4O00483 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA4O00483 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NDUFA4O00483 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NDUFA4O00483 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NDUFA4O00483 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.73□□□□□ -0.21
NDUFA4O00483 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA4O00483 TSPY22P-201ENST00000427496 604 ntBASIC13.73□□□□□ -0.21
NDUFA4O00483 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.73□□□□□ -0.21
NDUFA4O00483 MTCL1P1-201ENST00000446207 792 ntBASIC13.73□□□□□ -0.21
NDUFA4O00483 NTF6B-201ENST00000591913 560 ntBASIC13.73□□□□□ -0.21
NDUFA4O00483 AC011498.5-201ENST00000592027 486 ntBASIC13.73□□□□□ -0.21
NDUFA4O00483 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
NDUFA4O00483 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NDUFA4O00483 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NDUFA4O00483 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA4O00483 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA4O00483 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NDUFA4O00483 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.73□□□□□ -0.21
NDUFA4O00483 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA4O00483 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA4O00483 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.73□□□□□ -0.21
NDUFA4O00483 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NDUFA4O00483 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA4O00483 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.72□□□□□ -0.21
NDUFA4O00483 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA4O00483 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NDUFA4O00483 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.72□□□□□ -0.21
NDUFA4O00483 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.72□□□□□ -0.21
NDUFA4O00483 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA4O00483 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.72□□□□□ -0.21
NDUFA4O00483 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NDUFA4O00483 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
NDUFA4O00483 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA4O00483 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA4O00483 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA4O00483 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NDUFA4O00483 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms