Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.41■□□□□ 0.54
DFFAO00273 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DFFAO00273 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DFFAO00273 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DFFAO00273 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.41■□□□□ 0.54
DFFAO00273 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DFFAO00273 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DFFAO00273 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
DFFAO00273 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DFFAO00273 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DFFAO00273 GUSBP12-201ENST00000513727 720 ntBASIC18.41■□□□□ 0.54
DFFAO00273 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.41■□□□□ 0.54
DFFAO00273 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.41■□□□□ 0.54
DFFAO00273 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.41■□□□□ 0.54
DFFAO00273 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DFFAO00273 AP000550.4-202ENST00000639755 178 ntBASIC18.41■□□□□ 0.54
DFFAO00273 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.41■□□□□ 0.54
DFFAO00273 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DFFAO00273 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DFFAO00273 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.41■□□□□ 0.54
DFFAO00273 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DFFAO00273 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DFFAO00273 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DFFAO00273 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DFFAO00273 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DFFAO00273 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.4■□□□□ 0.54
DFFAO00273 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.4■□□□□ 0.54
DFFAO00273 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DFFAO00273 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
DFFAO00273 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DFFAO00273 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.4■□□□□ 0.54
DFFAO00273 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.4■□□□□ 0.54
DFFAO00273 AL121672.3-201ENST00000608644 468 ntBASIC18.4■□□□□ 0.54
DFFAO00273 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.4■□□□□ 0.54
DFFAO00273 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DFFAO00273 IGHV3-41-201ENST00000613121 348 ntBASIC18.4■□□□□ 0.54
DFFAO00273 AC124864.1-201ENST00000623408 392 ntBASIC18.4■□□□□ 0.54
DFFAO00273 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.4■□□□□ 0.54
DFFAO00273 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.4■□□□□ 0.54
DFFAO00273 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 NOC2LP2-201ENST00000407594 1944 ntBASIC18.4■□□□□ 0.54
DFFAO00273 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DFFAO00273 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DFFAO00273 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.4■□□□□ 0.54
DFFAO00273 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DFFAO00273 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
DFFAO00273 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DFFAO00273 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.39■□□□□ 0.54
DFFAO00273 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DFFAO00273 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
DFFAO00273 AC068880.1-201ENST00000507289 2297 ntBASIC18.39■□□□□ 0.54
DFFAO00273 KRT18P55-202ENST00000578578 1546 ntBASIC18.39■□□□□ 0.54
DFFAO00273 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
DFFAO00273 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 AC068472.1-201ENST00000474589 881 ntBASIC18.39■□□□□ 0.53
DFFAO00273 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.39■□□□□ 0.53
DFFAO00273 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.39■□□□□ 0.53
DFFAO00273 AC112698.1-201ENST00000510299 916 ntBASIC18.39■□□□□ 0.53
DFFAO00273 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.39■□□□□ 0.53
DFFAO00273 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.39■□□□□ 0.53
DFFAO00273 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.39■□□□□ 0.53
DFFAO00273 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DFFAO00273 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DFFAO00273 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DFFAO00273 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DFFAO00273 AC012317.2-201ENST00000623305 2251 ntBASIC18.38■□□□□ 0.53
DFFAO00273 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DFFAO00273 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms