Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 TSPY15P-201ENST00000457163 923 ntBASIC19.01■□□□□ 0.63
RCCD1A6NED2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 AL355075.4-201ENST00000554988 638 ntBASIC19.01■□□□□ 0.63
RCCD1A6NED2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19■□□□□ 0.63
RCCD1A6NED2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19■□□□□ 0.63
RCCD1A6NED2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19■□□□□ 0.63
RCCD1A6NED2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RCCD1A6NED2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RCCD1A6NED2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19■□□□□ 0.63
RCCD1A6NED2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19■□□□□ 0.63
RCCD1A6NED2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19■□□□□ 0.63
RCCD1A6NED2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19■□□□□ 0.63
RCCD1A6NED2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19■□□□□ 0.63
RCCD1A6NED2 LINC01451-201ENST00000623792 534 ntBASIC19■□□□□ 0.63
RCCD1A6NED2 AL157888.1-201ENST00000631930 593 ntBASIC19■□□□□ 0.63
RCCD1A6NED2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19■□□□□ 0.63
RCCD1A6NED2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RCCD1A6NED2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19■□□□□ 0.63
RCCD1A6NED2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RCCD1A6NED2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19■□□□□ 0.63
RCCD1A6NED2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
RCCD1A6NED2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19■□□□□ 0.63
RCCD1A6NED2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.99■□□□□ 0.63
RCCD1A6NED2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 PVRIG2P-201ENST00000435460 978 ntBASIC18.99■□□□□ 0.63
RCCD1A6NED2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 EGLN1P1-201ENST00000531623 762 ntBASIC18.99■□□□□ 0.63
RCCD1A6NED2 C2orf69P3-201ENST00000565542 1120 ntBASIC18.99■□□□□ 0.63
RCCD1A6NED2 NIFKP4-201ENST00000567275 1192 ntBASIC18.99■□□□□ 0.63
RCCD1A6NED2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 AC060834.1-201ENST00000443027 2032 ntBASIC18.99■□□□□ 0.63
RCCD1A6NED2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
RCCD1A6NED2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCCD1A6NED2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms