Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L3A6NE82 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L3A6NE82 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L3A6NE82 AC100803.2-201ENST00000562459 1963 ntBASIC15.66■□□□□ 0.1
MBD3L3A6NE82 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L3A6NE82 AC090164.3-201ENST00000610780 2143 ntBASIC15.65■□□□□ 0.1
MBD3L3A6NE82 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MBD3L3A6NE82 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
MBD3L3A6NE82 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
MBD3L3A6NE82 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 AC003669.1-201ENST00000334569 611 ntBASIC15.64■□□□□ 0.09
MBD3L3A6NE82 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 AC006557.2-201ENST00000592985 1240 ntBASIC15.64■□□□□ 0.09
MBD3L3A6NE82 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 AC019129.2-201ENST00000609837 1235 ntBASIC15.64■□□□□ 0.09
MBD3L3A6NE82 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 REXO1L9P-201ENST00000604264 2108 ntBASIC15.64■□□□□ 0.09
MBD3L3A6NE82 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.64■□□□□ 0.09
MBD3L3A6NE82 AC132938.5-201ENST00000624980 1813 ntBASIC15.64■□□□□ 0.09
MBD3L3A6NE82 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 AC104109.2-201ENST00000602919 1418 ntBASIC15.63■□□□□ 0.09
MBD3L3A6NE82 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.63■□□□□ 0.09
MBD3L3A6NE82 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L3A6NE82 AC009949.1-201ENST00000623048 1830 ntBASIC15.63■□□□□ 0.09
MBD3L3A6NE82 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms