Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
SBNO1A3KN83 PC-214ENST00000628663 1470 ntTSL 5 BASIC24.07■■□□□ 1.44
SBNO1A3KN83 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SBNO1A3KN83 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
SBNO1A3KN83 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SBNO1A3KN83 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SBNO1A3KN83 CROCCP3-202ENST00000420820 1947 ntBASIC24.06■■□□□ 1.44
SBNO1A3KN83 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SBNO1A3KN83 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SBNO1A3KN83 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SBNO1A3KN83 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC24.06■■□□□ 1.44
SBNO1A3KN83 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC24.06■■□□□ 1.44
SBNO1A3KN83 LHX6-205ENST00000464484 666 ntTSL 2 BASIC24.06■■□□□ 1.44
SBNO1A3KN83 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC24.06■■□□□ 1.44
SBNO1A3KN83 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC24.06■■□□□ 1.44
SBNO1A3KN83 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC24.06■■□□□ 1.44
SBNO1A3KN83 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SBNO1A3KN83 AC093010.1-201ENST00000473625 1624 ntBASIC24.06■■□□□ 1.44
SBNO1A3KN83 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
SBNO1A3KN83 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SBNO1A3KN83 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 AC003669.1-201ENST00000334569 611 ntBASIC24.05■■□□□ 1.44
SBNO1A3KN83 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC24.05■■□□□ 1.44
SBNO1A3KN83 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC24.05■■□□□ 1.44
SBNO1A3KN83 OR7E47P-204ENST00000575924 449 ntBASIC24.05■■□□□ 1.44
SBNO1A3KN83 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC24.05■■□□□ 1.44
SBNO1A3KN83 AQP6-205ENST00000618286 829 ntTSL 5 BASIC24.05■■□□□ 1.44
SBNO1A3KN83 AL513210.1-201ENST00000629608 234 ntBASIC24.05■■□□□ 1.44
SBNO1A3KN83 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC24.05■■□□□ 1.44
SBNO1A3KN83 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
SBNO1A3KN83 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC24.05■■□□□ 1.44
SBNO1A3KN83 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 GOLGA6L17P-202ENST00000614358 1398 ntBASIC24.05■■□□□ 1.44
SBNO1A3KN83 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC24.05■■□□□ 1.44
SBNO1A3KN83 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SBNO1A3KN83 SIRPAP1-201ENST00000448467 1770 ntBASIC24.05■■□□□ 1.44
SBNO1A3KN83 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SBNO1A3KN83 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SBNO1A3KN83 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC24.04■■□□□ 1.44
SBNO1A3KN83 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SBNO1A3KN83 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SBNO1A3KN83 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
SBNO1A3KN83 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SBNO1A3KN83 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SBNO1A3KN83 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SBNO1A3KN83 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SBNO1A3KN83 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
SBNO1A3KN83 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC24.04■■□□□ 1.44
SBNO1A3KN83 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
SBNO1A3KN83 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 FAM58CP-201ENST00000435741 640 ntBASIC24.03■■□□□ 1.44
SBNO1A3KN83 COX20P2-201ENST00000452636 358 ntBASIC24.03■■□□□ 1.44
SBNO1A3KN83 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 FUT8-AS1-201ENST00000621019 1521 ntBASIC24.03■■□□□ 1.44
SBNO1A3KN83 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SBNO1A3KN83 SIGLEC30P-201ENST00000455569 941 ntBASIC24.03■■□□□ 1.44
SBNO1A3KN83 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 SMN2-210ENST00000511812 867 ntTSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 DUTP2-201ENST00000519164 463 ntBASIC24.03■■□□□ 1.44
SBNO1A3KN83 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC24.03■■□□□ 1.44
SBNO1A3KN83 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms