Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 DUTP2-201ENST00000519164 463 ntBASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 AP000867.3-201ENST00000524675 377 ntBASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 TPSP2-201ENST00000561760 610 ntBASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 AL691432.3-201ENST00000621860 400 ntBASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
PTPDC1A2A3K4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 IGHGP-201ENST00000390555 1178 ntBASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 AC008687.5-201ENST00000593746 558 ntBASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 IGHV3-41-201ENST00000613121 348 ntBASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPDC1A2A3K4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 TPM4P1-201ENST00000436100 807 ntBASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 DRAXINP1-201ENST00000437611 948 ntBASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 TOB2P1-201ENST00000469761 992 ntBASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPDC1A2A3K4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 AC090616.6-201ENST00000582640 721 ntBASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms