Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 AC010460.3-201ENST00000511359 1579 ntBASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 RPS2P28-201ENST00000314255 741 ntBASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 AL590627.1-203ENST00000421194 1026 ntBASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 AC018712.1-201ENST00000455767 687 ntBASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 AC122714.2-201ENST00000502787 707 ntBASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 AC120114.3-201ENST00000611923 658 ntBASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 AC116407.2-201ENST00000613639 860 ntBASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 AC148477.8-201ENST00000624298 468 ntBASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV5A0A0B4J1U4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 AP000347.1-202ENST00000435868 847 ntBASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 RNA5SP419-201ENST00000515908 135 ntBASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 BX640515.1-201ENST00000617215 977 ntBASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 AL139288.1-201ENST00000623748 933 ntBASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRGV5A0A0B4J1U4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 AC103564.2-201ENST00000432853 1299 ntBASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.99■□□□□ 0.15
TRGV5A0A0B4J1U4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms