Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC016396.2-201ENST00000562575 1417 ntBASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 AP000523.1-201ENST00000398242 1049 ntBASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 LYSMD4-203ENST00000378904 2122 ntBASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV5-3A0A0A0MS03 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 MMP23A-201ENST00000234610 1017 ntBASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 GCSHP2-201ENST00000560971 527 ntBASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC079602.3-201ENST00000623931 403 ntBASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV5-3A0A0A0MS03 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms