Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 AL136379.1-201ENST00000623471 2642 ntBASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 AC008550.1-201ENST00000511500 884 ntBASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 AC093827.2-201ENST00000512654 315 ntBASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 RARRES2P10-201ENST00000564312 460 ntBASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 ZNF815P-204ENST00000434898 1737 ntBASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 PCDHA14-201ENST00000506751 2298 ntBASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV9-2A0A087WT02 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 AC018553.1-201ENST00000616682 1458 ntBASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 YBX1P10-201ENST00000444752 975 ntBASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV9-2A0A087WT02 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms