Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HS3ST3A1Q9Y663 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HS3ST3A1Q9Y663 AL049757.1-201ENST00000616842 1596 ntBASIC17.48■□□□□ 0.39
HS3ST3A1Q9Y663 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HS3ST3A1Q9Y663 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HS3ST3A1Q9Y663 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HS3ST3A1Q9Y663 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
HS3ST3A1Q9Y663 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HS3ST3A1Q9Y663 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.48■□□□□ 0.39
HS3ST3A1Q9Y663 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 AL020989.1-201ENST00000422979 469 ntBASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 AC098831.1-202ENST00000438821 336 ntBASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 DDX43P3-201ENST00000441064 443 ntBASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 GPALPP1-207ENST00000611650 899 ntBASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 AC093503.3-201ENST00000624917 2352 ntBASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 TNXA-203ENST00000507684 2038 ntBASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 PMS2P7-201ENST00000506558 1336 ntBASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HS3ST3A1Q9Y663 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 SIRPAP1-201ENST00000448467 1770 ntBASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 TERC-201ENST00000602385 541 ntBASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 AC006538.3-201ENST00000612495 578 ntBASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 BX276092.7-203ENST00000637198 1536 ntBASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HS3ST3A1Q9Y663 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HS3ST3A1Q9Y663 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.45■□□□□ 0.38
HS3ST3A1Q9Y663 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms