Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 POM121L3P-201ENST00000419331 1163 ntBASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 HEIH-201ENST00000623091 1652 ntBASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 AL022342.1-201ENST00000400363 863 ntBASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 SAPCD2P3-201ENST00000455031 850 ntBASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 AC011840.4-201ENST00000578471 627 ntBASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 AP005901.3-202ENST00000581653 237 ntBASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 REXO1L6P-202ENST00000619970 1078 ntBASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA3Q9Y5H0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 AL357033.4-201ENST00000617703 1807 ntBASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 AKR1C7P-201ENST00000305623 895 ntBASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 AC008687.5-201ENST00000593746 558 ntBASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA3Q9Y5H0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms