Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 IGHV3-47-201ENST00000425060 335 ntBASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 KRT18P41-201ENST00000518924 1277 ntBASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 AL592071.1-201ENST00000611956 408 ntBASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGA6Q9Y5G7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA6Q9Y5G7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA6Q9Y5G7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCDHGA6Q9Y5G7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA6Q9Y5G7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PCDHGA6Q9Y5G7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 VENTXP7-201ENST00000475503 772 ntBASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 HEIH-201ENST00000623091 1652 ntBASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA6Q9Y5G7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 AP000593.1-201ENST00000393668 712 ntBASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA6Q9Y5G7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA6Q9Y5G7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms