Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ABCD1P5-201ENST00000445663 754 ntBASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 FGFR3P6-201ENST00000457012 610 ntBASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 AC022898.2-201ENST00000616822 1312 ntBASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 FAM220CP-201ENST00000395253 831 ntBASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTDP1Q9Y5B0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 AP005117.1-201ENST00000584346 1413 ntBASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 AC148477.8-201ENST00000624298 468 ntBASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTDP1Q9Y5B0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.64■□□□□ 0.9
CTDP1Q9Y5B0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTDP1Q9Y5B0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTDP1Q9Y5B0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.64■□□□□ 0.9
CTDP1Q9Y5B0 AC132938.6-201ENST00000623828 1655 ntBASIC20.64■□□□□ 0.9
CTDP1Q9Y5B0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTDP1Q9Y5B0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.64■□□□□ 0.9
CTDP1Q9Y5B0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 IL9RP2-201ENST00000423948 1312 ntBASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms