Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT52Q9Y366 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT52Q9Y366 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.8■□□□□ 0.28
IFT52Q9Y366 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFT52Q9Y366 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 AC080080.1-201ENST00000625121 2420 ntBASIC16.79■□□□□ 0.28
IFT52Q9Y366 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 FAM87A-204ENST00000613235 858 ntBASIC16.79■□□□□ 0.28
IFT52Q9Y366 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 KRT18P55-202ENST00000578578 1546 ntBASIC16.79■□□□□ 0.28
IFT52Q9Y366 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT52Q9Y366 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.79■□□□□ 0.28
IFT52Q9Y366 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 AL596257.1-201ENST00000641463 2694 ntBASIC16.78■□□□□ 0.28
IFT52Q9Y366 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 ECEL1P2-202ENST00000465689 757 ntBASIC16.78■□□□□ 0.28
IFT52Q9Y366 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT52Q9Y366 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT52Q9Y366 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
IFT52Q9Y366 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IFT52Q9Y366 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.77■□□□□ 0.28
IFT52Q9Y366 CICP6-201ENST00000457191 2729 ntBASIC16.77■□□□□ 0.28
IFT52Q9Y366 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IFT52Q9Y366 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms