Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX2IPQ9Y2D8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 IL9RP2-201ENST00000423948 1312 ntBASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 RNA5SP419-201ENST00000515908 135 ntBASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX2IPQ9Y2D8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 KRT18P65-201ENST00000439811 1286 ntBASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX2IPQ9Y2D8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 AL138831.2-201ENST00000606564 490 ntBASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 AC006538.3-201ENST00000612495 578 ntBASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SSX2IPQ9Y2D8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms