Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 PHGDH-209ENST00000641074 1780 ntBASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 KRT8P47-201ENST00000604727 1398 ntBASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 AC122714.2-201ENST00000502787 707 ntBASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 AC055717.3-201ENST00000622967 595 ntBASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 AL022326.1-202ENST00000641533 845 ntBASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.61■□□□□ 0.57
DNMT3BQ9UBC3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 AC004408.2-201ENST00000623613 2777 ntBASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 AC093010.1-201ENST00000473625 1624 ntBASIC18.6■□□□□ 0.57
DNMT3BQ9UBC3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 AC073592.4-201ENST00000623827 446 ntBASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3BQ9UBC3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.58■□□□□ 0.57
DNMT3BQ9UBC3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.58■□□□□ 0.57
DNMT3BQ9UBC3 WIZP1-201ENST00000531444 2299 ntBASIC18.58■□□□□ 0.57
DNMT3BQ9UBC3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DNMT3BQ9UBC3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DNMT3BQ9UBC3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms