Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 AC246785.2-201ENST00000432512 513 ntBASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 BX276092.5-203ENST00000456199 560 ntBASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 DUTP2-201ENST00000519164 463 ntBASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 AL121672.3-201ENST00000608644 468 ntBASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 AC009154.2-201ENST00000621177 724 ntBASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 AC090340.1-201ENST00000620778 4980 ntBASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 HCG11-201ENST00000411553 5696 ntBASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.33■□□□□ 0.36
CUEDC1Q9NWM3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 AC004870.1-201ENST00000315132 882 ntBASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 FAAHP1-202ENST00000446499 1238 ntBASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUEDC1Q9NWM3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 AC111152.3-201ENST00000569699 673 ntBASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 AL592071.1-201ENST00000611956 408 ntBASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 AC006538.3-201ENST00000612495 578 ntBASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 AC012313.10-201ENST00000623509 926 ntBASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms