Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 LINC00304-203ENST00000565008 1864 ntBASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 TSSC2-201ENST00000450217 709 ntBASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 AP005901.3-202ENST00000581653 237 ntBASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 AC116407.2-201ENST00000613639 860 ntBASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BLOC1S4Q9NUP1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 AC010460.3-201ENST00000511359 1579 ntBASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BLOC1S4Q9NUP1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 MIR3180-1-201ENST00000580374 94 ntBASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 MIR3180-3-201ENST00000584616 94 ntBASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BLOC1S4Q9NUP1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 AC125634.1-201ENST00000438758 1403 ntBASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 AC097374.2-201ENST00000618617 1306 ntBASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 TPSP2-201ENST00000561760 610 ntBASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 AL138831.2-201ENST00000606564 490 ntBASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 NPAP1P7-201ENST00000613027 823 ntBASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms