Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 AC009947.1-201ENST00000444350 727 ntBASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 MTDHP5-201ENST00000598980 586 ntBASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 MTDHP4-201ENST00000600287 670 ntBASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM7Q9NR12 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 CYMP-203ENST00000474680 1263 ntBASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 AC112698.1-201ENST00000510299 916 ntBASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 NKAPP1-205ENST00000585790 367 ntBASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 BICD1-207ENST00000551848 1962 ntBASIC19.94■□□□□ 0.78
PDLIM7Q9NR12 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 RFPL4AP1-201ENST00000530883 850 ntBASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 AL596442.2-201ENST00000610240 980 ntBASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 AL020996.1-203ENST00000536896 2307 ntBASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
PDLIM7Q9NR12 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM7Q9NR12 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms