Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
C12orf4Q9NQ89 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 AC093677.2-201ENST00000600169 1863 ntBASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 ESRRAP1-201ENST00000400596 1257 ntBASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 CKBP1-201ENST00000565489 1086 ntBASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 MYLKP1-201ENST00000509077 1580 ntBASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C12orf4Q9NQ89 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 FLJ16779-201ENST00000612722 7638 ntBASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 KRT16P1-201ENST00000399124 1418 ntBASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 NKILA-202ENST00000614771 2598 ntBASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 AC011298.2-201ENST00000617989 482 ntBASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms