Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.74■□□□□ 0.91
VAT1LQ9HCJ6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.74■□□□□ 0.91
VAT1LQ9HCJ6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAT1LQ9HCJ6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 POM121L3P-201ENST00000419331 1163 ntBASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 EMBP1-201ENST00000458200 901 ntBASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 AC111152.3-201ENST00000569699 673 ntBASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 MIR5100-201ENST00000579544 119 ntBASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 AL138831.2-201ENST00000606564 490 ntBASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 AC022898.2-201ENST00000616822 1312 ntBASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.73■□□□□ 0.91
VAT1LQ9HCJ6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 BICD1-207ENST00000551848 1962 ntBASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 AC100803.2-201ENST00000562459 1963 ntBASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 KRT16P4-201ENST00000453883 522 ntBASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 KRT8P47-201ENST00000604727 1398 ntBASIC20.72■□□□□ 0.91
VAT1LQ9HCJ6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.71■□□□□ 0.91
VAT1LQ9HCJ6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms