Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC38A1Q9H2H9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 KRT18P48-201ENST00000434763 852 ntBASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 KRT18P57-201ENST00000443599 1254 ntBASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 KRT18P38-201ENST00000449496 1282 ntBASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 AC004263.2-201ENST00000617183 678 ntBASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 KRT8P47-201ENST00000604727 1398 ntBASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 AC139713.2-201ENST00000641328 2723 ntBASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 AC009949.1-201ENST00000623048 1830 ntBASIC16.59■□□□□ 0.25
SLC38A1Q9H2H9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC38A1Q9H2H9 AL645608.8-201ENST00000606034 2086 ntBASIC16.58■□□□□ 0.25
SLC38A1Q9H2H9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC38A1Q9H2H9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
SLC38A1Q9H2H9 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.58■□□□□ 0.25
SLC38A1Q9H2H9 BCL2-203ENST00000589955 5011 ntBASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 AC211429.1-201ENST00000415277 523 ntBASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 AC006011.2-201ENST00000621313 1158 ntBASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC38A1Q9H2H9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC38A1Q9H2H9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC38A1Q9H2H9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC38A1Q9H2H9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC38A1Q9H2H9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC38A1Q9H2H9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
SLC38A1Q9H2H9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SLC38A1Q9H2H9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms