Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.645e-6■■□□□ 14.1
CSTF2TQ9H0L4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.5□□□□□ -0.251e-323■■□□□ 14.1
CSTF2TQ9H0L4 DAGLA-202ENST00000540717 5699 ntTSL 515.69■□□□□ 0.12e-6■■□□□ 14.1
CSTF2TQ9H0L4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.032e-6■■□□□ 14.1
CSTF2TQ9H0L4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.47□□□□□ -1.211e-323■■□□□ 14.1
CSTF2TQ9H0L4 NPAS2-204ENST00000448812 774 ntTSL 510.59□□□□□ -0.712e-9■■□□□ 14.1
CSTF2TQ9H0L4 NPAS2-211ENST00000492373 552 ntTSL 48.58□□□□□ -1.042e-9■■□□□ 14.1
CSTF2TQ9H0L4 NPAS2-209ENST00000486017 764 ntTSL 35.89□□□□□ -1.472e-9■■□□□ 14.1
CSTF2TQ9H0L4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.086e-10■■□□□ 14.1
CSTF2TQ9H0L4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.076e-10■■□□□ 14.1
CSTF2TQ9H0L4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.066e-10■■□□□ 14.1
CSTF2TQ9H0L4 TMUB1-206ENST00000488752 584 ntTSL 221.02■□□□□ 0.966e-10■■□□□ 14.1
CSTF2TQ9H0L4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.536e-10■■□□□ 14.1
CSTF2TQ9H0L4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.166e-10■■□□□ 14.1
CSTF2TQ9H0L4 TMUB1-207ENST00000492838 550 ntTSL 510.3□□□□□ -0.766e-10■■□□□ 14.1
CSTF2TQ9H0L4 SEMA4C-202ENST00000442264 817 ntTSL 319.12■□□□□ 0.652e-10■■□□□ 14.1
CSTF2TQ9H0L4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.36□□□□□ -1.552e-10■■□□□ 14.1
CSTF2TQ9H0L4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.56■□□□□ 0.727e-9■■□□□ 14.1
CSTF2TQ9H0L4 KLF3-202ENST00000482150 517 ntTSL 213.35□□□□□ -0.277e-9■■□□□ 14.1
CSTF2TQ9H0L4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.386e-6■■□□□ 14.1
CSTF2TQ9H0L4 TMEM9-211ENST00000497582 1075 ntTSL 321.28■■□□□ 16e-6■■□□□ 14.1
CSTF2TQ9H0L4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.636e-6■■□□□ 14.1
CSTF2TQ9H0L4 RECQL5-217ENST00000583673 547 ntTSL 416.81■□□□□ 0.287e-6■■□□□ 14.1
CSTF2TQ9H0L4 RECQL5-212ENST00000580707 948 ntTSL 316.81■□□□□ 0.287e-6■■□□□ 14.1
CSTF2TQ9H0L4 TMEM9-206ENST00000435310 507 ntTSL 215.53■□□□□ 0.086e-6■■□□□ 14.1
CSTF2TQ9H0L4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.053e-10■■□□□ 14.1
CSTF2TQ9H0L4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.236e-6■■□□□ 14.1
CSTF2TQ9H0L4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.366e-6■■□□□ 14.1
CSTF2TQ9H0L4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.376e-6■■□□□ 14.1
CSTF2TQ9H0L4 TMEM9-205ENST00000414605 545 ntTSL 210.28□□□□□ -0.766e-6■■□□□ 14.1
CSTF2TQ9H0L4 XPO1-210ENST00000449444 579 ntTSL 44.73□□□□□ -1.657e-20■■□□□ 14.1
CSTF2TQ9H0L4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.26■□□□□ 0.352e-6■■□□□ 14.1
CSTF2TQ9H0L4 CHCHD3-202ENST00000423635 1310 ntTSL 1 (best)15.98■□□□□ 0.152e-6■■□□□ 14.1
CSTF2TQ9H0L4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.042e-6■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.745e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.675e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.145e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.115e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-207ENST00000361140 2701 ntTSL 1 (best)14.33□□□□□ -0.125e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.185e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.375e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.475e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-209ENST00000368330 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.85e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-204ENST00000354691 2498 ntTSL 29.8□□□□□ -0.845e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-215ENST00000436865 2684 ntTSL 1 (best)8.44□□□□□ -1.065e-9■■□□□ 14.1
CSTF2TQ9H0L4 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.085e-9■■□□□ 14.1
CSTF2TQ9H0L4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.736e-6■■□□□ 14.1
CSTF2TQ9H0L4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.355e-7■■□□□ 14.1
CSTF2TQ9H0L4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.33■■□□□ 1.336e-8■■□□□ 14
CSTF2TQ9H0L4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.016e-8■■□□□ 14
CSTF2TQ9H0L4 GADD45A-203ENST00000460575 874 ntTSL 221.29■■□□□ 16e-8■■□□□ 14
CSTF2TQ9H0L4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.26■□□□□ 0.836e-8■■□□□ 14
CSTF2TQ9H0L4 GADD45A-204ENST00000484245 688 ntTSL 1 (best)20.18■□□□□ 0.826e-8■■□□□ 14
CSTF2TQ9H0L4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.778e-8■■□□□ 14
CSTF2TQ9H0L4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.028e-8■■□□□ 14
CSTF2TQ9H0L4 P4HA2-204ENST00000379100 2563 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.728e-8■■□□□ 14
CSTF2TQ9H0L4 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.728e-8■■□□□ 14
CSTF2TQ9H0L4 P4HA2-207ENST00000401867 3349 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.858e-8■■□□□ 14
CSTF2TQ9H0L4 P4HA2-203ENST00000379086 2223 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.888e-8■■□□□ 14
CSTF2TQ9H0L4 MEMO1-205ENST00000413686 769 ntTSL 315.06■□□□□ 03e-10■■□□□ 14
CSTF2TQ9H0L4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.77□□□□□ -0.213e-10■■□□□ 14
CSTF2TQ9H0L4 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC11.08□□□□□ -0.643e-10■■□□□ 14
CSTF2TQ9H0L4 PKP4-205ENST00000426248 4134 ntTSL 1 (best)15.23■□□□□ 0.033e-7■■□□□ 14
CSTF2TQ9H0L4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.026e-7■■□□□ 14
CSTF2TQ9H0L4 ARHGEF1-210ENST00000594521 826 ntTSL 516.32■□□□□ 0.25e-7■■□□□ 14
CSTF2TQ9H0L4 AGAP1-203ENST00000402604 563 ntTSL 411.63□□□□□ -0.557e-7■■□□□ 14
CSTF2TQ9H0L4 SDC1-204ENST00000429035 646 ntTSL 313.81□□□□□ -0.21e-6■■□□□ 14
CSTF2TQ9H0L4 STXBP5-202ENST00000367475 521 ntTSL 59.24□□□□□ -0.932e-7■■□□□ 14
CSTF2TQ9H0L4 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.022e-7■■□□□ 14
CSTF2TQ9H0L4 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.7□□□□□ -1.182e-7■■□□□ 14
CSTF2TQ9H0L4 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.192e-7■■□□□ 14
CSTF2TQ9H0L4 STXBP5-205ENST00000392291 791 ntTSL 57.07□□□□□ -1.282e-7■■□□□ 14
CSTF2TQ9H0L4 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.571e-8■■□□□ 14
CSTF2TQ9H0L4 RARA-209ENST00000579727 564 ntTSL 415.23■□□□□ 0.037e-7■■□□□ 14
CSTF2TQ9H0L4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.193e-8■■□□□ 14
CSTF2TQ9H0L4 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.613e-13■■□□□ 14
CSTF2TQ9H0L4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.095e-6■■□□□ 14
CSTF2TQ9H0L4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.383e-7■■□□□ 14
CSTF2TQ9H0L4 ZEB2-219ENST00000475115 536 ntTSL 58.96□□□□□ -0.981e-6■■□□□ 14
CSTF2TQ9H0L4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.98■□□□□ 0.154e-6■■□□□ 14
CSTF2TQ9H0L4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.1■□□□□ 0.014e-6■■□□□ 14
CSTF2TQ9H0L4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.01□□□□□ -0.174e-6■■□□□ 14
CSTF2TQ9H0L4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.234e-6■■□□□ 14
CSTF2TQ9H0L4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.324e-14■■□□□ 14
CSTF2TQ9H0L4 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.76□□□□□ -0.374e-6■■□□□ 14
CSTF2TQ9H0L4 ZMYM3-209ENST00000489332 5723 ntTSL 510.91□□□□□ -0.664e-6■■□□□ 14
CSTF2TQ9H0L4 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.834e-6■■□□□ 14
CSTF2TQ9H0L4 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC9.63□□□□□ -0.874e-6■■□□□ 14
CSTF2TQ9H0L4 MAP2K7-205ENST00000468058 1589 ntTSL 223.58■■□□□ 1.374e-7■■□□□ 14
CSTF2TQ9H0L4 RER1-208ENST00000493207 686 ntTSL 215.62■□□□□ 0.091e-7■■□□□ 14
CSTF2TQ9H0L4 FAM19A5-201ENST00000336769 546 ntTSL 411.37□□□□□ -0.592e-6■■□□□ 14
CSTF2TQ9H0L4 SLC12A7-206ENST00000634447 3142 ntTSL 512.51□□□□□ -0.417e-7■■□□□ 14
CSTF2TQ9H0L4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.03■□□□□ -07e-12■■□□□ 14
CSTF2TQ9H0L4 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.887e-12■■□□□ 14
CSTF2TQ9H0L4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.242e-9■■□□□ 14
CSTF2TQ9H0L4 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.675e-7■■□□□ 14
CSTF2TQ9H0L4 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.2□□□□□ -1.261e-7■■□□□ 14
CSTF2TQ9H0L4 FAR2P1-206ENST00000449736 709 ntBASIC6.59□□□□□ -1.351e-7■■□□□ 14
CSTF2TQ9H0L4 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.842e-18■■□□□ 14
CSTF2TQ9H0L4 ZNF217-203ENST00000431687 779 ntTSL 58.24□□□□□ -1.092e-18■■□□□ 14
Retrieved 100 of 19,151 protein–RNA pairs in 148 ms