Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF38Q9H0F5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF38Q9H0F5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF38Q9H0F5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF38Q9H0F5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
RNF38Q9H0F5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF38Q9H0F5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF38Q9H0F5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF38Q9H0F5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.52■□□□□ 0.55
RNF38Q9H0F5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF38Q9H0F5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.52■□□□□ 0.55
RNF38Q9H0F5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 AL049840.3-201ENST00000602669 611 ntBASIC18.51■□□□□ 0.55
RNF38Q9H0F5 REXO1L9P-201ENST00000604264 2108 ntBASIC18.51■□□□□ 0.55
RNF38Q9H0F5 AP000867.4-201ENST00000641616 219 ntBASIC18.51■□□□□ 0.55
RNF38Q9H0F5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RNF38Q9H0F5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 AC090164.3-201ENST00000610780 2143 ntBASIC18.5■□□□□ 0.55
RNF38Q9H0F5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 AC100803.2-201ENST00000562459 1963 ntBASIC18.5■□□□□ 0.55
RNF38Q9H0F5 AC009113.1-201ENST00000570267 2443 ntBASIC18.5■□□□□ 0.55
RNF38Q9H0F5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 AL590627.1-203ENST00000421194 1026 ntBASIC18.5■□□□□ 0.55
RNF38Q9H0F5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 AC021087.4-201ENST00000563761 564 ntBASIC18.5■□□□□ 0.55
RNF38Q9H0F5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 BX640515.1-201ENST00000617215 977 ntBASIC18.5■□□□□ 0.55
RNF38Q9H0F5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF38Q9H0F5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 SCARNA2-201ENST00000458748 420 ntBASIC18.49■□□□□ 0.55
RNF38Q9H0F5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms