Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXB1Q99853 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXB1Q99853 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
FOXB1Q99853 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
FOXB1Q99853 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
FOXB1Q99853 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXB1Q99853 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
FOXB1Q99853 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
FOXB1Q99853 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 NOC2LP2-201ENST00000407594 1944 ntBASIC15.77■□□□□ 0.12
FOXB1Q99853 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXB1Q99853 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXB1Q99853 AC112698.1-201ENST00000510299 916 ntBASIC15.77■□□□□ 0.12
FOXB1Q99853 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
FOXB1Q99853 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
FOXB1Q99853 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.77■□□□□ 0.12
FOXB1Q99853 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
FOXB1Q99853 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXB1Q99853 AL592071.1-201ENST00000611956 408 ntBASIC15.77■□□□□ 0.12
FOXB1Q99853 IGHV3-41-201ENST00000613121 348 ntBASIC15.77■□□□□ 0.12
FOXB1Q99853 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
FOXB1Q99853 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXB1Q99853 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FOXB1Q99853 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.77■□□□□ 0.11
FOXB1Q99853 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.77■□□□□ 0.11
FOXB1Q99853 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXB1Q99853 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXB1Q99853 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
FOXB1Q99853 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.77■□□□□ 0.11
FOXB1Q99853 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.77■□□□□ 0.11
FOXB1Q99853 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXB1Q99853 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXB1Q99853 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
FOXB1Q99853 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXB1Q99853 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FOXB1Q99853 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXB1Q99853 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXB1Q99853 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
FOXB1Q99853 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
FOXB1Q99853 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXB1Q99853 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXB1Q99853 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXB1Q99853 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 AC116407.2-201ENST00000613639 860 ntBASIC15.76■□□□□ 0.11
FOXB1Q99853 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.76■□□□□ 0.11
FOXB1Q99853 AC124864.1-201ENST00000623408 392 ntBASIC15.76■□□□□ 0.11
FOXB1Q99853 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FOXB1Q99853 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXB1Q99853 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
FOXB1Q99853 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXB1Q99853 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXB1Q99853 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXB1Q99853 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXB1Q99853 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXB1Q99853 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXB1Q99853 AC016734.2-201ENST00000624325 1377 ntBASIC15.75■□□□□ 0.11
FOXB1Q99853 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXB1Q99853 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
FOXB1Q99853 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXB1Q99853 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXB1Q99853 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
FOXB1Q99853 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXB1Q99853 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
FOXB1Q99853 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
FOXB1Q99853 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
FOXB1Q99853 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXB1Q99853 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXB1Q99853 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXB1Q99853 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
FOXB1Q99853 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXB1Q99853 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms