Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMOQ99835 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.76■□□□□ 0.59
SMOQ99835 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMOQ99835 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.75■□□□□ 0.59
SMOQ99835 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.75■□□□□ 0.59
SMOQ99835 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SMOQ99835 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
SMOQ99835 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.75■□□□□ 0.59
SMOQ99835 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SMOQ99835 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SMOQ99835 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.75■□□□□ 0.59
SMOQ99835 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.75■□□□□ 0.59
SMOQ99835 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SMOQ99835 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.75■□□□□ 0.59
SMOQ99835 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.75■□□□□ 0.59
SMOQ99835 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SMOQ99835 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMOQ99835 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.74■□□□□ 0.59
SMOQ99835 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
SMOQ99835 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SMOQ99835 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.74■□□□□ 0.59
SMOQ99835 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SMOQ99835 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SMOQ99835 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SMOQ99835 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SMOQ99835 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMOQ99835 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 FAM220CP-201ENST00000395253 831 ntBASIC18.74■□□□□ 0.59
SMOQ99835 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.74■□□□□ 0.59
SMOQ99835 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.74■□□□□ 0.59
SMOQ99835 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.74■□□□□ 0.59
SMOQ99835 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.74■□□□□ 0.59
SMOQ99835 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.74■□□□□ 0.59
SMOQ99835 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.74■□□□□ 0.59
SMOQ99835 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SMOQ99835 LINC01711-201ENST00000598340 967 ntBASIC18.74■□□□□ 0.59
SMOQ99835 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.74■□□□□ 0.59
SMOQ99835 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.74■□□□□ 0.59
SMOQ99835 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.74■□□□□ 0.59
SMOQ99835 REXO1L6P-202ENST00000619970 1078 ntBASIC18.74■□□□□ 0.59
SMOQ99835 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.74■□□□□ 0.59
SMOQ99835 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMOQ99835 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.74■□□□□ 0.59
SMOQ99835 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMOQ99835 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SMOQ99835 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SMOQ99835 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SMOQ99835 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.73■□□□□ 0.59
SMOQ99835 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.73■□□□□ 0.59
SMOQ99835 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.73■□□□□ 0.59
SMOQ99835 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.73■□□□□ 0.59
SMOQ99835 COX5BP2-201ENST00000392354 334 ntBASIC18.73■□□□□ 0.59
SMOQ99835 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 TPM4P1-201ENST00000436100 807 ntBASIC18.73■□□□□ 0.59
SMOQ99835 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.73■□□□□ 0.59
SMOQ99835 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.73■□□□□ 0.59
SMOQ99835 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.73■□□□□ 0.59
SMOQ99835 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.73■□□□□ 0.59
SMOQ99835 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.73■□□□□ 0.59
SMOQ99835 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.73■□□□□ 0.59
SMOQ99835 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.73■□□□□ 0.59
SMOQ99835 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMOQ99835 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms