Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LITAFQ99732 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.92□□□□□ -0.5
LITAFQ99732 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.91□□□□□ -0.5
LITAFQ99732 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
LITAFQ99732 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 GPAT2P1-201ENST00000444924 1672 ntBASIC11.91□□□□□ -0.5
LITAFQ99732 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
LITAFQ99732 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC11.91□□□□□ -0.5
LITAFQ99732 DERL1-203ENST00000419562 918 ntTSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC11.91□□□□□ -0.5
LITAFQ99732 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC11.91□□□□□ -0.5
LITAFQ99732 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 AC016396.2-201ENST00000562575 1417 ntBASIC11.91□□□□□ -0.5
LITAFQ99732 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.91□□□□□ -0.5
LITAFQ99732 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
LITAFQ99732 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.91□□□□□ -0.5
LITAFQ99732 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
LITAFQ99732 AC092171.3-201ENST00000610122 2651 ntBASIC11.91□□□□□ -0.5
LITAFQ99732 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC11.91□□□□□ -0.5
LITAFQ99732 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LITAFQ99732 AC132938.6-201ENST00000623828 1655 ntBASIC11.91□□□□□ -0.5
LITAFQ99732 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
LITAFQ99732 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 AC078925.2-201ENST00000624013 1973 ntBASIC11.9□□□□□ -0.5
LITAFQ99732 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 RNF216P1-203ENST00000404404 2427 ntBASIC11.9□□□□□ -0.5
LITAFQ99732 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC11.9□□□□□ -0.5
LITAFQ99732 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC11.9□□□□□ -0.5
LITAFQ99732 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 AC034268.1-201ENST00000441047 882 ntBASIC11.9□□□□□ -0.5
LITAFQ99732 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms