Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 OR6D1P-203ENST00000641209 4860 ntBASIC13.94□□□□□ -0.18
DUX3Q96PT4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 IGHV3-47-201ENST00000425060 335 ntBASIC13.94□□□□□ -0.18
DUX3Q96PT4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 LINC01711-201ENST00000598340 967 ntBASIC13.94□□□□□ -0.18
DUX3Q96PT4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX3Q96PT4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
DUX3Q96PT4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 AC096582.2-201ENST00000510860 516 ntBASIC13.93□□□□□ -0.18
DUX3Q96PT4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX3Q96PT4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
DUX3Q96PT4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 ESPNP-201ENST00000270691 2015 ntBASIC13.92□□□□□ -0.18
DUX3Q96PT4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 AC079781.3-201ENST00000449110 356 ntBASIC13.92□□□□□ -0.18
DUX3Q96PT4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 AL031008.1-201ENST00000619963 541 ntBASIC13.92□□□□□ -0.18
DUX3Q96PT4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX3Q96PT4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.92□□□□□ -0.18
DUX3Q96PT4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms