Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 FAM8A6P-201ENST00000407496 1135 ntBASIC16.95■□□□□ 0.3
COL21A1Q96P44 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 AL359075.1-203ENST00000462729 1002 ntBASIC16.95■□□□□ 0.3
COL21A1Q96P44 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL21A1Q96P44 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL21A1Q96P44 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 SPDYE15P-201ENST00000424157 909 ntBASIC16.94■□□□□ 0.3
COL21A1Q96P44 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.94■□□□□ 0.3
COL21A1Q96P44 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL21A1Q96P44 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 AC099398.1-201ENST00000567919 2776 ntBASIC16.93■□□□□ 0.3
COL21A1Q96P44 AC012317.2-201ENST00000623305 2251 ntBASIC16.93■□□□□ 0.3
COL21A1Q96P44 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.93■□□□□ 0.3
COL21A1Q96P44 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.93■□□□□ 0.3
COL21A1Q96P44 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL21A1Q96P44 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 LINC01126-201ENST00000623515 1646 ntBASIC16.92■□□□□ 0.3
COL21A1Q96P44 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms