Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 KRT8P47-201ENST00000604727 1398 ntBASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 AC111152.3-201ENST00000569699 673 ntBASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 AL121772.3-201ENST00000610840 674 ntBASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
PRICKLE1Q96MT3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 DUTP2-201ENST00000519164 463 ntBASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 AC125634.1-201ENST00000438758 1403 ntBASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE1Q96MT3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PRICKLE1Q96MT3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 AC091304.2-201ENST00000564639 760 ntBASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 RN7SL510P-201ENST00000581311 263 ntBASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 AC114341.1-201ENST00000618070 349 ntBASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 AC068880.1-201ENST00000507289 2297 ntBASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE1Q96MT3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms