Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1LQ96KA5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 MIR149-201ENST00000384879 89 ntBASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 AL023284.2-201ENST00000405850 579 ntBASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 GUSBP6-202ENST00000438529 1198 ntBASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 UNC93B4-201ENST00000505679 747 ntBASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1LQ96KA5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLPTM1LQ96KA5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLPTM1LQ96KA5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.21■□□□□ 0.34
CLPTM1LQ96KA5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLPTM1LQ96KA5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLPTM1LQ96KA5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 AC026185.1-201ENST00000445748 174 ntBASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 AC098934.4-201ENST00000564127 592 ntBASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 GPAT2P1-201ENST00000444924 1672 ntBASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1LQ96KA5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 HYMAI-201ENST00000635591 3347 ntBASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 MIR4758-201ENST00000577688 71 ntBASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPTM1LQ96KA5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms