Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.42■□□□□ 0.22
HPS1Q92902 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HPS1Q92902 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS1Q92902 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HPS1Q92902 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.42■□□□□ 0.22
HPS1Q92902 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS1Q92902 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HPS1Q92902 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS1Q92902 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.42■□□□□ 0.22
HPS1Q92902 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
HPS1Q92902 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.41■□□□□ 0.22
HPS1Q92902 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.41■□□□□ 0.22
HPS1Q92902 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.41■□□□□ 0.22
HPS1Q92902 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.41■□□□□ 0.22
HPS1Q92902 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.41■□□□□ 0.22
HPS1Q92902 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HPS1Q92902 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.41■□□□□ 0.22
HPS1Q92902 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.41■□□□□ 0.22
HPS1Q92902 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.41■□□□□ 0.22
HPS1Q92902 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HPS1Q92902 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
HPS1Q92902 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HPS1Q92902 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
HPS1Q92902 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.41■□□□□ 0.22
HPS1Q92902 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 CROCCP2-202ENST00000412962 2773 ntBASIC16.41■□□□□ 0.22
HPS1Q92902 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HPS1Q92902 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS1Q92902 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.4■□□□□ 0.22
HPS1Q92902 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.4■□□□□ 0.22
HPS1Q92902 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.4■□□□□ 0.22
HPS1Q92902 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
HPS1Q92902 PP12613-201ENST00000424958 2230 ntBASIC16.4■□□□□ 0.22
HPS1Q92902 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HPS1Q92902 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.4■□□□□ 0.22
HPS1Q92902 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 AC026271.3-201ENST00000571884 352 ntBASIC16.4■□□□□ 0.22
HPS1Q92902 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 AL031985.4-201ENST00000642138 673 ntBASIC16.4■□□□□ 0.22
HPS1Q92902 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HPS1Q92902 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.4■□□□□ 0.22
HPS1Q92902 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HPS1Q92902 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms