Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTRA1Q92743 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTRA1Q92743 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTRA1Q92743 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTRA1Q92743 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.59■□□□□ 0.25
HTRA1Q92743 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.59■□□□□ 0.25
HTRA1Q92743 FITM1-202ENST00000559294 800 ntBASIC16.59■□□□□ 0.25
HTRA1Q92743 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HTRA1Q92743 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTRA1Q92743 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.59■□□□□ 0.25
HTRA1Q92743 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.59■□□□□ 0.25
HTRA1Q92743 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HTRA1Q92743 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTRA1Q92743 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.59■□□□□ 0.25
HTRA1Q92743 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.59■□□□□ 0.25
HTRA1Q92743 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTRA1Q92743 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.59■□□□□ 0.25
HTRA1Q92743 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.58■□□□□ 0.25
HTRA1Q92743 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTRA1Q92743 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HTRA1Q92743 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.58■□□□□ 0.25
HTRA1Q92743 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTRA1Q92743 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.58■□□□□ 0.25
HTRA1Q92743 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HTRA1Q92743 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTRA1Q92743 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HTRA1Q92743 UBALD1-205ENST00000590891 2641 ntBASIC16.58■□□□□ 0.25
HTRA1Q92743 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HTRA1Q92743 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.58■□□□□ 0.24
HTRA1Q92743 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HTRA1Q92743 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HTRA1Q92743 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.58■□□□□ 0.24
HTRA1Q92743 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.58■□□□□ 0.24
HTRA1Q92743 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HTRA1Q92743 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.58■□□□□ 0.24
HTRA1Q92743 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 RCC2P3-201ENST00000418112 1537 ntBASIC16.58■□□□□ 0.24
HTRA1Q92743 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.58■□□□□ 0.24
HTRA1Q92743 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HTRA1Q92743 PCDH8P1-201ENST00000428983 2773 ntBASIC16.58■□□□□ 0.24
HTRA1Q92743 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HTRA1Q92743 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HTRA1Q92743 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.58■□□□□ 0.24
HTRA1Q92743 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTRA1Q92743 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HTRA1Q92743 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HTRA1Q92743 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.57■□□□□ 0.24
HTRA1Q92743 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.57■□□□□ 0.24
HTRA1Q92743 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.57■□□□□ 0.24
HTRA1Q92743 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.57■□□□□ 0.24
HTRA1Q92743 HEIH-201ENST00000623091 1652 ntBASIC16.57■□□□□ 0.24
HTRA1Q92743 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.57■□□□□ 0.24
HTRA1Q92743 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.57■□□□□ 0.24
HTRA1Q92743 MTMR9LP-203ENST00000426597 1545 ntBASIC16.57■□□□□ 0.24
HTRA1Q92743 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HTRA1Q92743 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.57■□□□□ 0.24
HTRA1Q92743 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.57■□□□□ 0.24
HTRA1Q92743 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.57■□□□□ 0.24
HTRA1Q92743 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.57■□□□□ 0.24
HTRA1Q92743 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HTRA1Q92743 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
HTRA1Q92743 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HTRA1Q92743 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.57■□□□□ 0.24
HTRA1Q92743 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.57■□□□□ 0.24
HTRA1Q92743 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.57■□□□□ 0.24
HTRA1Q92743 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.57■□□□□ 0.24
HTRA1Q92743 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HTRA1Q92743 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTRA1Q92743 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HTRA1Q92743 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.56■□□□□ 0.24
HTRA1Q92743 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTRA1Q92743 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms