Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT9Q92600 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT9Q92600 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CNOT9Q92600 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CNOT9Q92600 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 AC104076.2-201ENST00000448912 469 ntBASIC16.53■□□□□ 0.24
CNOT9Q92600 AL359075.1-203ENST00000462729 1002 ntBASIC16.53■□□□□ 0.24
CNOT9Q92600 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT9Q92600 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT9Q92600 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.53■□□□□ 0.24
CNOT9Q92600 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.53■□□□□ 0.24
CNOT9Q92600 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 LINC00896-202ENST00000609602 2128 ntBASIC16.53■□□□□ 0.24
CNOT9Q92600 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT9Q92600 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT9Q92600 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CNOT9Q92600 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT9Q92600 KRT89P-201ENST00000620027 1478 ntBASIC16.53■□□□□ 0.24
CNOT9Q92600 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT9Q92600 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT9Q92600 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNOT9Q92600 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.52■□□□□ 0.24
CNOT9Q92600 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT9Q92600 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT9Q92600 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT9Q92600 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT9Q92600 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT9Q92600 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT9Q92600 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CNOT9Q92600 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CNOT9Q92600 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT9Q92600 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT9Q92600 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.52■□□□□ 0.24
CNOT9Q92600 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CNOT9Q92600 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.52■□□□□ 0.24
CNOT9Q92600 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.52■□□□□ 0.24
CNOT9Q92600 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.52■□□□□ 0.24
CNOT9Q92600 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.52■□□□□ 0.24
CNOT9Q92600 AC012313.1-201ENST00000593393 3059 ntBASIC16.52■□□□□ 0.23
CNOT9Q92600 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.52■□□□□ 0.23
CNOT9Q92600 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
CNOT9Q92600 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT9Q92600 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT9Q92600 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT9Q92600 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT9Q92600 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
CNOT9Q92600 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT9Q92600 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CNOT9Q92600 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.51■□□□□ 0.23
CNOT9Q92600 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CNOT9Q92600 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CNOT9Q92600 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT9Q92600 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CNOT9Q92600 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.51■□□□□ 0.23
CNOT9Q92600 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 FAM8A6P-201ENST00000407496 1135 ntBASIC16.51■□□□□ 0.23
CNOT9Q92600 KRT18P48-201ENST00000434763 852 ntBASIC16.51■□□□□ 0.23
CNOT9Q92600 HOMER2P1-201ENST00000455653 964 ntBASIC16.51■□□□□ 0.23
CNOT9Q92600 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 AC004263.2-201ENST00000617183 678 ntBASIC16.51■□□□□ 0.23
CNOT9Q92600 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNOT9Q92600 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT9Q92600 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNOT9Q92600 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT9Q92600 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CNOT9Q92600 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.51■□□□□ 0.23
CNOT9Q92600 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT9Q92600 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT9Q92600 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms